App URL
https://apps.healthuniverse.com/ixn-juz-brn
Status
Ready
Created On
Updated On
Different methods of sequence parsing. Histogram of Sequence Lengths: Generate histogram of the length distribution within a sequence dataset. Plot of sequence GC%: Generate a plot of the calculated quantity of a nucleotide sequence for GC%. Nucleotide Dot Plot: Generate dot plot to visually compare two nucleotide sequences for similarity to each other Quality Scores of Sequencing Read Data Plot: Generate plot of sequencing read quality scores for data assessment and analysis.

More details

Use Cases Limitations Evidence Owner's Insight

The app provides various sequence parsing methods, allowing users to analyze sequence data through features such as a histogram of sequence lengths, a plot of sequence GC%, a nucleotide dot plot for sequence comparison, and a plot of quality scores for sequencing read data assessment.

The effectiveness of the app may be limited by the quality and quantity of the input sequence data.

Based on the Biopython Github: https://github.com/biopython/biopython

Try it out with this fasta file! https://github.com/biopython/biopython/blob/master/Doc/examples/ls_orchid.fasta
Stable

Warning: App may appear to work well but has not been peer reviewed. Not intended for clinical use. Use with caution.

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  • Executions: 19
  • Drug Discovery & Development

Owner

Kinal Patel

Member since