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simonsnitz/Ligify
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This app focuses on predicting protein-ligand interactions. Bacteria respond to chemical cues using protein transcription regulators. Ligify is a search tool used to mine regulators responsive to user-defined metabolites.

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Ligify simplifies the task of identifying bacterial sensor proteins responsive to specific chemical signals. Researchers input the chemical's details, and Ligify swiftly retrieves relevant sensor candidates, presenting them alongside key search metrics. Users can explore each candidate's details, enabling rapid insights into microbial responses to environmental cues. With Ligify, researchers streamline sensor discovery, advancing our understanding of bacterial behaviors and interactions.

See owner's GitHub repository for more information: https://github.com/simonsnitz/Ligify

Simon d’Oelsnitz, Andrew D. Ellington, David J. Ross. "Ligify: Automated genome mining for ligand-inducible transcription factors." bioRxiv 2024.02.20.581298. doi: https://doi.org/10.1101/2024.02.20.581298

This application was not uploaded by the author, but through their publicly available Github repository, https://github.com/simonsnitz/Ligify.

Prototype

Warning: Not intended for clinical use. Assume outputs are unsafe and unvalidated. Use carefully.


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